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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T RPL3 chr22:39708887-39716394:- 0.59 6.47 2.46E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T RPS19BP1 chr22:39925098-39928860:- 0.47 7.02 7.54E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T RTN4R chr22:20228938-20270769:- 0.68 7.06 6.0E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T S100A1 chr1:153600402-153604515:+ -0.53 -6.29 7.09E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T SAMM50 chr22:44351301-44406411:+ 0.71 8.28 1.29E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T SAPS2 chr22:50781760-50883514:+ 0.89 9.18 1.34E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T SBF1 chr22:50883429-50913453:- 0.61 6.45 2.73E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T SCO2 chr22:50961997-50964868:- 0.46 7.33 1.01E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T SEC14L2 chr22:30792846-30821305:+ 0.6 6.34 5.21E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T SELO chr22:50639408-50656045:+ 0.64 9.01 4.99E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T SESN3 chr11:94898677-94965705:- 0.44 5.97 4.65E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T SF3A1 chr22:30727977-30752936:- 0.59 7.89 2.08E-14 Box Plot
THCA rs5998366 chr22:32665525 C/T SGSM3 chr22:40766595-40806293:+ 0.54 7.14 3.58E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T SLC25A17 chr22:41165634-41215403:- 0.67 7.37 7.66E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T SMARCB1 chr22:24129150-24176703:+ 0.75 7.81 3.72E-14 Box Plot